Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp9xP70398 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Gm6755-201ENSMUST00000100598 864 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Gm6740-201ENSMUST00000100617 864 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Usp9xP70398 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp9xP70398 Gm9369-201ENSMUST00000196009 733 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Gm9102-201ENSMUST00000219250 465 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp9xP70398 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp9xP70398 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 AC154354.1-203ENSMUST00000225565 1364 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp9xP70398 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp9xP70398 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usp9xP70398 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp9xP70398 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC9.61□□□□□ -0.87
Usp9xP70398 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Kif4-ps-202ENSMUST00000185083 652 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Gm43866-201ENSMUST00000203894 839 ntBASIC9.61□□□□□ -0.87
Usp9xP70398 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp9xP70398 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp9xP70398 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm26047-201ENSMUST00000157308 113 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Gm38103-201ENSMUST00000191707 864 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Gm26047-202ENSMUST00000198840 115 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Gm42689-201ENSMUST00000202403 404 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC9.6□□□□□ -0.87
Usp9xP70398 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 AC166361.2-201ENSMUST00000219269 1415 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm4294-201ENSMUST00000105169 614 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm16219-201ENSMUST00000120096 274 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.6□□□□□ -0.87
Usp9xP70398 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Usp9xP70398 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp9xP70398 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Usp9xP70398 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp9xP70398 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp9xP70398 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp9xP70398 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp9xP70398 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp9xP70398 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.59□□□□□ -0.87
Usp9xP70398 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Usp9xP70398 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms