Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.45□□□□□ -0.58
Shox2P70390 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shox2P70390 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 AA474408-201ENSMUST00000098110 3339 ntBASIC11.44□□□□□ -0.58
Shox2P70390 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Shox2P70390 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Shox2P70390 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Shox2P70390 Gm7722-201ENSMUST00000120646 741 ntBASIC11.44□□□□□ -0.58
Shox2P70390 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gm8738-201ENSMUST00000172606 329 ntBASIC11.44□□□□□ -0.58
Shox2P70390 Gm28882-201ENSMUST00000185504 314 ntBASIC11.44□□□□□ -0.58
Shox2P70390 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.44□□□□□ -0.58
Shox2P70390 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.44□□□□□ -0.58
Shox2P70390 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Shox2P70390 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gm15823-201ENSMUST00000064305 670 ntBASIC11.44□□□□□ -0.58
Shox2P70390 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Shox2P70390 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shox2P70390 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shox2P70390 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.43□□□□□ -0.58
Shox2P70390 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Gm11500-201ENSMUST00000118237 601 ntBASIC11.43□□□□□ -0.58
Shox2P70390 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.43□□□□□ -0.58
Shox2P70390 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Shox2P70390 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Gm20949-201ENSMUST00000206478 952 ntBASIC11.43□□□□□ -0.58
Shox2P70390 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.43□□□□□ -0.58
Shox2P70390 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Shox2P70390 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shox2P70390 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms