Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cux2P70298 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cux2P70298 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Gm28671-201ENSMUST00000187036 692 ntBASIC18.7■□□□□ 0.58
Cux2P70298 Gm44420-201ENSMUST00000203669 490 ntBASIC18.7■□□□□ 0.58
Cux2P70298 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC18.7■□□□□ 0.58
Cux2P70298 Gm3926-201ENSMUST00000223378 1123 ntBASIC18.7■□□□□ 0.58
Cux2P70298 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cux2P70298 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Gm18986-201ENSMUST00000216029 1986 ntBASIC18.7■□□□□ 0.58
Cux2P70298 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cux2P70298 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC18.69■□□□□ 0.58
Cux2P70298 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Gm5510-201ENSMUST00000117826 486 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC18.69■□□□□ 0.58
Cux2P70298 Gm16441-201ENSMUST00000138176 924 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Cux2P70298 Mrip-ps-201ENSMUST00000184613 940 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Gm42687-201ENSMUST00000199075 164 ntBASIC18.69■□□□□ 0.58
Cux2P70298 AC133517.1-201ENSMUST00000225825 594 ntBASIC18.69■□□□□ 0.58
Cux2P70298 AC118639.1-202ENSMUST00000226957 653 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Gm10020-201ENSMUST00000081993 612 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Gm43242-201ENSMUST00000199507 1776 ntBASIC18.69■□□□□ 0.58
Cux2P70298 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC18.69■□□□□ 0.58
Cux2P70298 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cux2P70298 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cux2P70298 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC18.69■□□□□ 0.58
Cux2P70298 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux2P70298 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC18.68■□□□□ 0.58
Cux2P70298 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cux2P70298 Gm44917-201ENSMUST00000208798 520 ntBASIC18.68■□□□□ 0.58
Cux2P70298 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC18.68■□□□□ 0.58
Cux2P70298 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC18.68■□□□□ 0.58
Cux2P70298 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC18.68■□□□□ 0.58
Cux2P70298 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cux2P70298 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC18.68■□□□□ 0.58
Cux2P70298 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC18.68■□□□□ 0.58
Cux2P70298 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Cux2P70298 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cux2P70298 Gm37160-201ENSMUST00000193081 1689 ntBASIC18.67■□□□□ 0.58
Cux2P70298 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cux2P70298 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC18.67■□□□□ 0.58
Cux2P70298 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cux2P70298 Gm38103-201ENSMUST00000191707 864 ntBASIC18.67■□□□□ 0.58
Cux2P70298 Gm44908-201ENSMUST00000208610 266 ntBASIC18.67■□□□□ 0.58
Cux2P70298 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Cux2P70298 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC18.67■□□□□ 0.58
Cux2P70298 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cux2P70298 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cux2P70298 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms