Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.9□□□□□ -0.66
Six5P70178 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.9□□□□□ -0.66
Six5P70178 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Six5P70178 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Six5P70178 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.9□□□□□ -0.66
Six5P70178 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.9□□□□□ -0.66
Six5P70178 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Six5P70178 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Six5P70178 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Six5P70178 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.9□□□□□ -0.67
Six5P70178 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Six5P70178 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Six5P70178 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Six5P70178 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Six5P70178 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Gm8199-201ENSMUST00000121323 823 ntBASIC10.89□□□□□ -0.67
Six5P70178 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.89□□□□□ -0.67
Six5P70178 Gm45113-201ENSMUST00000207518 165 ntBASIC10.89□□□□□ -0.67
Six5P70178 Gm19208-201ENSMUST00000213861 912 ntBASIC10.89□□□□□ -0.67
Six5P70178 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Six5P70178 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.89□□□□□ -0.67
Six5P70178 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.89□□□□□ -0.67
Six5P70178 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Six5P70178 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Six5P70178 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.89□□□□□ -0.67
Six5P70178 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Six5P70178 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.89□□□□□ -0.67
Six5P70178 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.89□□□□□ -0.67
Six5P70178 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Six5P70178 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.88□□□□□ -0.67
Six5P70178 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm23200-201ENSMUST00000104379 132 ntBASIC10.88□□□□□ -0.67
Six5P70178 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Gm7851-201ENSMUST00000117574 323 ntBASIC10.88□□□□□ -0.67
Six5P70178 Gm4909-201ENSMUST00000118749 794 ntBASIC10.88□□□□□ -0.67
Six5P70178 Gm13461-201ENSMUST00000120980 662 ntBASIC10.88□□□□□ -0.67
Six5P70178 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.88□□□□□ -0.67
Six5P70178 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.88□□□□□ -0.67
Six5P70178 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.88□□□□□ -0.67
Six5P70178 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.88□□□□□ -0.67
Six5P70178 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Six5P70178 Gm29499-201ENSMUST00000189151 486 ntBASIC10.88□□□□□ -0.67
Six5P70178 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Six5P70178 Gm28329-201ENSMUST00000191208 689 ntBASIC10.88□□□□□ -0.67
Six5P70178 Gm29171-201ENSMUST00000191397 486 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms