Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm5298-201ENSMUST00000201122 892 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm35960-201ENSMUST00000202712 767 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm45120-201ENSMUST00000208880 408 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm6722-201ENSMUST00000221586 390 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lmo4P61969 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Lmo4P61969 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Lmo4P61969 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm8111-201ENSMUST00000117659 987 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm15528-201ENSMUST00000117821 864 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm12274-201ENSMUST00000120062 385 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm12628-201ENSMUST00000122193 382 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm21778-201ENSMUST00000178779 471 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.37□□□□□ -0.91
Lmo4P61969 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm3726-201ENSMUST00000203110 785 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.37□□□□□ -0.91
Lmo4P61969 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lmo4P61969 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Lmo4P61969 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lmo4P61969 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.36□□□□□ -0.91
Lmo4P61969 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lmo4P61969 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lmo4P61969 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms