Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Sec61a1P61620 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Sec61a1P61620 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sec61a1P61620 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm25700-201ENSMUST00000177693 110 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm28882-201ENSMUST00000185504 314 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm13097-201ENSMUST00000210722 397 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.27□□□□□ -0.77
Sec61a1P61620 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.27□□□□□ -0.77
Sec61a1P61620 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sec61a1P61620 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm12997-201ENSMUST00000120207 640 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm9083-201ENSMUST00000120423 819 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm18304-201ENSMUST00000189162 546 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm42937-201ENSMUST00000197360 752 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm45224-201ENSMUST00000208203 414 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gzmn-202ENSMUST00000225535 989 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sec61a1P61620 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.26□□□□□ -0.77
Sec61a1P61620 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sec61a1P61620 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms