Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.99□□□□□ -0.65
Nup43P59235 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.99□□□□□ -0.65
Nup43P59235 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nup43P59235 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nup43P59235 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nup43P59235 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nup43P59235 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Gm12566-201ENSMUST00000121479 359 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.98□□□□□ -0.65
Nup43P59235 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.98□□□□□ -0.65
Nup43P59235 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Gm6108-201ENSMUST00000208365 367 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.98□□□□□ -0.65
Nup43P59235 Spcs1-203ENSMUST00000226374 592 ntBASIC10.98□□□□□ -0.65
Nup43P59235 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.98□□□□□ -0.65
Nup43P59235 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Nup43P59235 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.98□□□□□ -0.65
Nup43P59235 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup43P59235 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup43P59235 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Nup43P59235 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Gm9062-201ENSMUST00000117712 727 ntBASIC10.97□□□□□ -0.65
Nup43P59235 Gm8731-201ENSMUST00000118088 412 ntBASIC10.97□□□□□ -0.65
Nup43P59235 Gm11500-201ENSMUST00000118237 601 ntBASIC10.97□□□□□ -0.65
Nup43P59235 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.97□□□□□ -0.65
Nup43P59235 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.97□□□□□ -0.65
Nup43P59235 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nup43P59235 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.97□□□□□ -0.65
Nup43P59235 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup43P59235 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms