Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
Tpm2P58774 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm12058-201ENSMUST00000118614 437 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.36□□□□□ -0.27
Tpm2P58774 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm6222-202ENSMUST00000182143 629 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.36□□□□□ -0.27
Tpm2P58774 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.35□□□□□ -0.27
Tpm2P58774 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm13570-201ENSMUST00000140763 309 ntBASIC13.35□□□□□ -0.27
Tpm2P58774 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.35□□□□□ -0.27
Tpm2P58774 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.35□□□□□ -0.27
Tpm2P58774 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Tpm2P58774 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 AC121870.2-201ENSMUST00000214343 1870 ntBASIC13.35□□□□□ -0.27
Tpm2P58774 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm2P58774 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.35□□□□□ -0.27
Tpm2P58774 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.35□□□□□ -0.27
Tpm2P58774 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm2P58774 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Tpm2P58774 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.34□□□□□ -0.27
Tpm2P58774 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.34□□□□□ -0.27
Tpm2P58774 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.34□□□□□ -0.27
Tpm2P58774 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.34□□□□□ -0.27
Tpm2P58774 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tpm2P58774 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Gm10434-201ENSMUST00000101158 471 ntBASIC13.34□□□□□ -0.27
Tpm2P58774 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tpm2P58774 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.34□□□□□ -0.27
Tpm2P58774 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.34□□□□□ -0.27
Tpm2P58774 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Gm10463-202ENSMUST00000195772 2889 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms