Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Gm25148-201ENSMUST00000104611 123 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.23□□□□□ -0.45
NcanP55066 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm12072-201ENSMUST00000118293 715 ntBASIC12.23□□□□□ -0.45
NcanP55066 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.23□□□□□ -0.45
NcanP55066 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm17782-201ENSMUST00000174345 880 ntBASIC12.23□□□□□ -0.45
NcanP55066 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Mir6359-201ENSMUST00000183668 81 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm27440-201ENSMUST00000184785 107 ntBASIC12.23□□□□□ -0.45
NcanP55066 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.23□□□□□ -0.45
NcanP55066 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.23□□□□□ -0.45
NcanP55066 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.23□□□□□ -0.45
NcanP55066 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.23□□□□□ -0.45
NcanP55066 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NcanP55066 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NcanP55066 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NcanP55066 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NcanP55066 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.23□□□□□ -0.45
NcanP55066 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NcanP55066 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NcanP55066 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NcanP55066 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.22□□□□□ -0.45
NcanP55066 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NcanP55066 Gm6755-201ENSMUST00000100598 864 ntBASIC12.22□□□□□ -0.45
NcanP55066 Gm6740-201ENSMUST00000100617 864 ntBASIC12.22□□□□□ -0.45
NcanP55066 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.22□□□□□ -0.45
NcanP55066 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.22□□□□□ -0.45
NcanP55066 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.22□□□□□ -0.45
NcanP55066 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
NcanP55066 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Gm6114-201ENSMUST00000182472 968 ntBASIC12.22□□□□□ -0.45
NcanP55066 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.22□□□□□ -0.45
NcanP55066 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.22□□□□□ -0.45
NcanP55066 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.22□□□□□ -0.45
NcanP55066 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NcanP55066 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NcanP55066 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms