Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox1P53783 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox1P53783 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox1P53783 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox1P53783 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm12389-201ENSMUST00000117696 418 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm14113-201ENSMUST00000121399 976 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox1P53783 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm42751-201ENSMUST00000198065 559 ntBASIC11.9□□□□□ -0.5
Sox1P53783 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox1P53783 Gm26782-203ENSMUST00000227103 751 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.9□□□□□ -0.5
Sox1P53783 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox1P53783 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox1P53783 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox1P53783 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox1P53783 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Mir705-201ENSMUST00000102058 82 ntBASIC11.89□□□□□ -0.51
Sox1P53783 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox1P53783 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox1P53783 Gm8268-201ENSMUST00000209683 458 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Gm3635-201ENSMUST00000212314 354 ntBASIC11.89□□□□□ -0.51
Sox1P53783 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox1P53783 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox1P53783 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox1P53783 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox1P53783 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms