Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Map1b-203ENSMUST00000223725 2669 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lbx1P52955 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Gm6946-201ENSMUST00000182237 987 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Mir7035-201ENSMUST00000184713 82 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Gm44908-201ENSMUST00000208610 266 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Gm8255-201ENSMUST00000218693 305 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Gm5194-201ENSMUST00000221457 742 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lbx1P52955 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.32□□□□□ -0.6
Lbx1P52955 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lbx1P52955 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.31□□□□□ -0.6
Lbx1P52955 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm16209-201ENSMUST00000118457 627 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm15197-201ENSMUST00000120526 478 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm10171-201ENSMUST00000126220 628 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.31□□□□□ -0.6
Lbx1P52955 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm42660-201ENSMUST00000197733 947 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm18711-201ENSMUST00000199341 750 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Gm2566-201ENSMUST00000201267 431 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lbx1P52955 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lbx1P52955 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lbx1P52955 Gm10233-201ENSMUST00000089275 628 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.31□□□□□ -0.6
Lbx1P52955 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.31□□□□□ -0.6
Lbx1P52955 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lbx1P52955 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lbx1P52955 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lbx1P52955 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Gm5205-201ENSMUST00000182253 1003 ntBASIC11.3□□□□□ -0.6
Lbx1P52955 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.3□□□□□ -0.6
Lbx1P52955 Gm42687-201ENSMUST00000199075 164 ntBASIC11.3□□□□□ -0.6
Lbx1P52955 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.3□□□□□ -0.6
Lbx1P52955 Gm7727-201ENSMUST00000219830 671 ntBASIC11.3□□□□□ -0.6
Lbx1P52955 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.3□□□□□ -0.6
Lbx1P52955 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lbx1P52955 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms