Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SftpbP50405 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SftpbP50405 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SftpbP50405 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.86□□□□□ -0.51
SftpbP50405 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.86□□□□□ -0.51
SftpbP50405 Gm8885-201ENSMUST00000189382 598 ntBASIC11.86□□□□□ -0.51
SftpbP50405 Rprl1-202ENSMUST00000198476 238 ntBASIC11.86□□□□□ -0.51
SftpbP50405 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Cts7-204ENSMUST00000225321 1257 ntBASIC11.86□□□□□ -0.51
SftpbP50405 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.86□□□□□ -0.51
SftpbP50405 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SftpbP50405 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SftpbP50405 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SftpbP50405 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SftpbP50405 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SftpbP50405 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 Gm14127-201ENSMUST00000117906 678 ntBASIC11.85□□□□□ -0.51
SftpbP50405 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.85□□□□□ -0.51
SftpbP50405 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.85□□□□□ -0.51
SftpbP50405 Gm32999-201ENSMUST00000192693 562 ntBASIC11.85□□□□□ -0.51
SftpbP50405 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SftpbP50405 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.85□□□□□ -0.51
SftpbP50405 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.85□□□□□ -0.51
SftpbP50405 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.85□□□□□ -0.51
SftpbP50405 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SftpbP50405 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SftpbP50405 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpbP50405 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SftpbP50405 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms