Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Gm45784-201ENSMUST00000188360 142 ntBASIC10.85□□□□□ -0.67
Sox2P48432 Gm19287-201ENSMUST00000203190 358 ntBASIC10.85□□□□□ -0.67
Sox2P48432 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox2P48432 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox2P48432 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.85□□□□□ -0.67
Sox2P48432 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sox2P48432 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox2P48432 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox2P48432 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sox2P48432 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox2P48432 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox2P48432 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Gm13226-201ENSMUST00000117838 404 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Mospd4-201ENSMUST00000180618 576 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Gm43133-201ENSMUST00000197472 463 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.84□□□□□ -0.67
Sox2P48432 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox2P48432 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sox2P48432 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.84□□□□□ -0.67
Sox2P48432 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Sox2P48432 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Sox2P48432 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox2P48432 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms