Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Gm13916-201ENSMUST00000117368 628 ntBASIC12.21□□□□□ -0.45
Rfx2P48379 Gm13888-201ENSMUST00000119148 422 ntBASIC12.21□□□□□ -0.45
Rfx2P48379 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.21□□□□□ -0.45
Rfx2P48379 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rfx2P48379 Mir6546-201ENSMUST00000184460 62 ntBASIC12.21□□□□□ -0.45
Rfx2P48379 Gm44545-201ENSMUST00000208262 746 ntBASIC12.21□□□□□ -0.45
Rfx2P48379 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Gm45398-201ENSMUST00000210561 165 ntBASIC12.21□□□□□ -0.45
Rfx2P48379 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfx2P48379 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rfx2P48379 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfx2P48379 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.21□□□□□ -0.46
Rfx2P48379 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rfx2P48379 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.46
Rfx2P48379 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfx2P48379 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rfx2P48379 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm15566-201ENSMUST00000121130 590 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm14460-201ENSMUST00000121511 639 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm8737-201ENSMUST00000122208 642 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.2□□□□□ -0.46
Rfx2P48379 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm27530-201ENSMUST00000184096 98 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.2□□□□□ -0.46
Rfx2P48379 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfx2P48379 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Rfx2P48379 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.2□□□□□ -0.46
Rfx2P48379 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.19□□□□□ -0.46
Rfx2P48379 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.19□□□□□ -0.46
Rfx2P48379 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.19□□□□□ -0.46
Rfx2P48379 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rfx2P48379 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rfx2P48379 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.19□□□□□ -0.46
Rfx2P48379 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 122.6 ms