Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx1P48377 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rfx1P48377 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.85□□□□□ -0.19
Rfx1P48377 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx1P48377 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Gm14644-201ENSMUST00000116671 647 ntBASIC13.85□□□□□ -0.19
Rfx1P48377 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.85□□□□□ -0.19
Rfx1P48377 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx1P48377 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Rfx1P48377 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.85□□□□□ -0.19
Rfx1P48377 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rfx1P48377 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rfx1P48377 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.85□□□□□ -0.19
Rfx1P48377 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx1P48377 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx1P48377 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfx1P48377 Gm5370-201ENSMUST00000187187 574 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Gm807-202ENSMUST00000224929 408 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Morn2-202ENSMUST00000227729 656 ntBASIC13.84□□□□□ -0.19
Rfx1P48377 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfx1P48377 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx1P48377 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx1P48377 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.83□□□□□ -0.19
Rfx1P48377 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx1P48377 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx1P48377 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Rfx1P48377 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Rfx1P48377 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rfx1P48377 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Gm11425-201ENSMUST00000119608 498 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx1P48377 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.83□□□□□ -0.2
Rfx1P48377 Gm6013-201ENSMUST00000212264 699 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 Gm10608-202ENSMUST00000213924 676 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Gm9396-201ENSMUST00000076703 567 ntBASIC13.83□□□□□ -0.2
Rfx1P48377 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfx1P48377 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfx1P48377 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx1P48377 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx1P48377 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms