Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.05□□□□□ -0.64
Cdx2P43241 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Cdx2P43241 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdx2P43241 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdx2P43241 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Gm11960-201ENSMUST00000122068 925 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdx2P43241 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Gm16030-201ENSMUST00000159098 603 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.04□□□□□ -0.64
Cdx2P43241 Mir7051-201ENSMUST00000184167 73 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdx2P43241 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdx2P43241 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdx2P43241 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.04□□□□□ -0.64
Cdx2P43241 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdx2P43241 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdx2P43241 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Gm11578-201ENSMUST00000118530 459 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Gm12943-201ENSMUST00000119616 210 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Gm14993-201ENSMUST00000121180 164 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Gm22846-201ENSMUST00000157706 270 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Gm5870-201ENSMUST00000196461 282 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx2P43241 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.03□□□□□ -0.64
Cdx2P43241 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdx2P43241 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx2P43241 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Cdx2P43241 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms