Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.65□□□□□ -0.7
Nkx2-2P42586 Gm19208-201ENSMUST00000213861 912 ntBASIC10.65□□□□□ -0.7
Nkx2-2P42586 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx2-2P42586 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-2P42586 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Nkx2-2P42586 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-2P42586 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx2-2P42586 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-2P42586 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx2-2P42586 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm15566-201ENSMUST00000121130 590 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm3150-201ENSMUST00000166418 204 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.64□□□□□ -0.71
Nkx2-2P42586 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-2P42586 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm23251-201ENSMUST00000103773 110 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm12407-201ENSMUST00000180219 324 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.63□□□□□ -0.71
Nkx2-2P42586 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-2P42586 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms