Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm13296-201ENSMUST00000117854 997 ntBASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm44364-201ENSMUST00000198368 141 ntBASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm43822-201ENSMUST00000200285 476 ntBASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm9899-201ENSMUST00000065519 555 ntBASIC14.27□□□□□ -0.13
Nkx1-2P42580 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 AC207128.2-201ENSMUST00000223708 1924 ntBASIC14.27□□□□□ -0.13
Nkx1-2P42580 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm14381-201ENSMUST00000122105 414 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm15276-201ENSMUST00000145953 498 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm20482-202ENSMUST00000174729 825 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm3961-201ENSMUST00000204425 994 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm7783-201ENSMUST00000204795 781 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC14.26□□□□□ -0.13
Nkx1-2P42580 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx1-2P42580 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.25□□□□□ -0.13
Nkx1-2P42580 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm22133-201ENSMUST00000102082 109 ntBASIC14.25□□□□□ -0.13
Nkx1-2P42580 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm11660-201ENSMUST00000120955 412 ntBASIC14.25□□□□□ -0.13
Nkx1-2P42580 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.25□□□□□ -0.13
Nkx1-2P42580 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx1-2P42580 Gm37031-201ENSMUST00000195487 2530 ntBASIC14.24□□□□□ -0.13
Nkx1-2P42580 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx1-2P42580 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms