Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chd1P40201 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Chd1P40201 Gm14592-201ENSMUST00000117201 560 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chd1P40201 Gm15793-201ENSMUST00000121857 495 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC17.04■□□□□ 0.32
Chd1P40201 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Gm42599-201ENSMUST00000201308 469 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Gm44388-201ENSMUST00000204350 258 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC17.04■□□□□ 0.32
Chd1P40201 BX649293.1-201ENSMUST00000227437 631 ntBASIC17.04■□□□□ 0.32
Chd1P40201 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd1P40201 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chd1P40201 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Chd1P40201 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chd1P40201 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Gm14153-201ENSMUST00000119923 1139 ntBASIC17.03■□□□□ 0.32
Chd1P40201 Gm11544-201ENSMUST00000120215 382 ntBASIC17.03■□□□□ 0.32
Chd1P40201 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Gm9273-201ENSMUST00000200606 715 ntBASIC17.03■□□□□ 0.32
Chd1P40201 Gm2566-201ENSMUST00000201267 431 ntBASIC17.03■□□□□ 0.32
Chd1P40201 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chd1P40201 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chd1P40201 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd1P40201 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm44292-201ENSMUST00000205194 2364 ntBASIC17.02■□□□□ 0.32
Chd1P40201 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm23129-201ENSMUST00000104259 132 ntBASIC17.02■□□□□ 0.32
Chd1P40201 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Chd1P40201 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC17.02■□□□□ 0.32
Chd1P40201 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC17.02■□□□□ 0.32
Chd1P40201 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd1P40201 Gm37058-201ENSMUST00000193393 1644 ntBASIC17.02■□□□□ 0.32
Chd1P40201 Matn2-206ENSMUST00000228570 2798 ntBASIC17.02■□□□□ 0.32
Chd1P40201 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chd1P40201 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd1P40201 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd1P40201 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd1P40201 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd1P40201 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd1P40201 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Gm14227-201ENSMUST00000119431 629 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Gm12950-201ENSMUST00000121683 417 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC17.01■□□□□ 0.31
Chd1P40201 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd1P40201 Gm22662-201ENSMUST00000175290 256 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC17.01■□□□□ 0.31
Chd1P40201 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Gm38385-201ENSMUST00000194454 2351 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms