Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.79□□□□□ -0.68
Hoxc5P32043 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxc5P32043 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxc5P32043 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxc5P32043 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hoxc5P32043 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxc5P32043 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm13296-201ENSMUST00000117854 997 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm15276-201ENSMUST00000145953 498 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm17376-201ENSMUST00000166016 84 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm7584-201ENSMUST00000175829 940 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm37259-201ENSMUST00000193903 849 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm38317-201ENSMUST00000195564 343 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hoxc5P32043 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Rgr-203ENSMUST00000225070 4704 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxc5P32043 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.78□□□□□ -0.68
Hoxc5P32043 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxc5P32043 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
Hoxc5P32043 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Hoxc5P32043 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Hoxc5P32043 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Hoxc5P32043 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxc5P32043 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Hoxc5P32043 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hoxc5P32043 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm22323-201ENSMUST00000103832 109 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hoxc5P32043 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm3961-201ENSMUST00000204425 994 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm7783-201ENSMUST00000204795 781 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Gm45331-201ENSMUST00000209868 554 ntBASIC10.77□□□□□ -0.69
Hoxc5P32043 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxc5P32043 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms