Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm15207-201ENSMUST00000119259 442 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm11667-201ENSMUST00000119828 486 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm14665-201ENSMUST00000122294 557 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm7666-201ENSMUST00000146631 819 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Mir7032-201ENSMUST00000185154 79 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm17931-201ENSMUST00000208132 634 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxc11P31313 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Hoxc11P31313 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm14460-201ENSMUST00000121511 639 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm12208-201ENSMUST00000122004 163 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm22144-201ENSMUST00000157402 102 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm4310-201ENSMUST00000177847 889 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm29499-201ENSMUST00000189151 486 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm28329-201ENSMUST00000191208 689 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm29171-201ENSMUST00000191397 486 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.31□□□□□ -0.6
Hoxc11P31313 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm9132-201ENSMUST00000210182 832 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm45398-201ENSMUST00000210561 165 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.31□□□□□ -0.6
Hoxc11P31313 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxc11P31313 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxc11P31313 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxc11P31313 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc11P31313 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxc11P31313 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc11P31313 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc11P31313 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxc11P31313 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hoxc11P31313 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxc11P31313 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Hoxc11P31313 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms