Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VimP20152 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VimP20152 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.75□□□□□ -0.53
VimP20152 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.75□□□□□ -0.53
VimP20152 Gm23935-201ENSMUST00000102303 57 ntBASIC11.75□□□□□ -0.53
VimP20152 Gm24270-201ENSMUST00000102326 57 ntBASIC11.75□□□□□ -0.53
VimP20152 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VimP20152 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.75□□□□□ -0.53
VimP20152 Gm11803-201ENSMUST00000119966 444 ntBASIC11.75□□□□□ -0.53
VimP20152 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm24245-201ENSMUST00000157318 57 ntBASIC11.75□□□□□ -0.53
VimP20152 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VimP20152 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.75□□□□□ -0.53
VimP20152 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VimP20152 Gm38241-201ENSMUST00000192641 898 ntBASIC11.75□□□□□ -0.53
VimP20152 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Gm18624-201ENSMUST00000220966 658 ntBASIC11.75□□□□□ -0.53
VimP20152 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.75□□□□□ -0.53
VimP20152 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.75□□□□□ -0.53
VimP20152 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VimP20152 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.75□□□□□ -0.53
VimP20152 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
VimP20152 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VimP20152 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.74□□□□□ -0.53
VimP20152 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.74□□□□□ -0.53
VimP20152 Rprl1-201ENSMUST00000158050 327 ntBASIC11.74□□□□□ -0.53
VimP20152 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Gm42937-201ENSMUST00000197360 752 ntBASIC11.74□□□□□ -0.53
VimP20152 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VimP20152 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
VimP20152 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VimP20152 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VimP20152 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VimP20152 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VimP20152 Gm12502-201ENSMUST00000120197 444 ntBASIC11.73□□□□□ -0.53
VimP20152 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
VimP20152 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VimP20152 Gm16215-201ENSMUST00000161990 637 ntBASIC11.73□□□□□ -0.53
VimP20152 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms