Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm25343-201ENSMUST00000157460 107 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm20414-201ENSMUST00000172918 646 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Mir6923-201ENSMUST00000184592 72 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm26670-202ENSMUST00000226862 340 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Hoxc9P09633 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxc9P09633 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Hoxc9P09633 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.98□□□□□ -0.01
Hoxc9P09633 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm25562-201ENSMUST00000104608 133 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm12389-201ENSMUST00000117696 418 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm15036-201ENSMUST00000118880 400 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm17070-201ENSMUST00000170463 784 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gm43778-201ENSMUST00000199438 199 ntBASIC14.97□□□□□ -0.01
Hoxc9P09633 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.97□□□□□ -0.01
Hoxc9P09633 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxc9P09633 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Gm11979-201ENSMUST00000119629 743 ntBASIC14.96□□□□□ -0.01
Hoxc9P09633 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hoxc9P09633 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxc9P09633 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms