Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P06344 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
P06344 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P06344 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
P06344 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P06344 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P06344 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.38□□□□□ -0.75
P06344 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P06344 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.37□□□□□ -0.75
P06344 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.37□□□□□ -0.75
P06344 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P06344 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P06344 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P06344 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gm22144-201ENSMUST00000157402 102 ntBASIC10.37□□□□□ -0.75
P06344 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
P06344 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.37□□□□□ -0.75
P06344 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Gm38151-201ENSMUST00000195085 289 ntBASIC10.37□□□□□ -0.75
P06344 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.37□□□□□ -0.75
P06344 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.37□□□□□ -0.75
P06344 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
P06344 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.37□□□□□ -0.75
P06344 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.37□□□□□ -0.75
P06344 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P06344 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gm8420-201ENSMUST00000097103 598 ntBASIC10.37□□□□□ -0.75
P06344 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P06344 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.37□□□□□ -0.75
P06344 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P06344 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
P06344 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.36□□□□□ -0.75
P06344 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P06344 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.36□□□□□ -0.75
P06344 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm15573-201ENSMUST00000119487 540 ntBASIC10.36□□□□□ -0.75
P06344 Gm12176-201ENSMUST00000121420 875 ntBASIC10.36□□□□□ -0.75
P06344 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.36□□□□□ -0.75
P06344 Gm7666-201ENSMUST00000146631 819 ntBASIC10.36□□□□□ -0.75
P06344 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.36□□□□□ -0.75
P06344 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.36□□□□□ -0.75
P06344 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.36□□□□□ -0.75
P06344 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.36□□□□□ -0.75
P06344 Gm45770-201ENSMUST00000212105 616 ntBASIC10.36□□□□□ -0.75
P06344 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
P06344 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
P06344 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P06344 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.36□□□□□ -0.75
P06344 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms