Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P04213 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.12□□□□□ -0.63
P04213 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.12□□□□□ -0.63
P04213 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P04213 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.11□□□□□ -0.63
P04213 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P04213 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.11□□□□□ -0.63
P04213 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.11□□□□□ -0.63
P04213 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
P04213 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.11□□□□□ -0.63
P04213 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.11□□□□□ -0.63
P04213 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
P04213 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
P04213 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.11□□□□□ -0.63
P04213 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gm45186-201ENSMUST00000206874 478 ntBASIC11.11□□□□□ -0.63
P04213 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P04213 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P04213 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P04213 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.11□□□□□ -0.63
P04213 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.11□□□□□ -0.63
P04213 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
P04213 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04213 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
P04213 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.1□□□□□ -0.63
P04213 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04213 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.1□□□□□ -0.63
P04213 Gm11663-201ENSMUST00000117888 290 ntBASIC11.1□□□□□ -0.63
P04213 Gm11783-201ENSMUST00000119549 885 ntBASIC11.1□□□□□ -0.63
P04213 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Gm8566-201ENSMUST00000120174 465 ntBASIC11.1□□□□□ -0.63
P04213 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.1□□□□□ -0.63
P04213 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.1□□□□□ -0.63
P04213 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
P04213 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.1□□□□□ -0.63
P04213 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.1□□□□□ -0.63
P04213 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04213 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.1□□□□□ -0.63
P04213 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.1□□□□□ -0.63
P04213 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04213 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms