Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.48□□□□□ -1.05
TcraP01849 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Gm5403-201ENSMUST00000117105 2795 ntBASIC8.48□□□□□ -1.05
TcraP01849 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.48□□□□□ -1.05
TcraP01849 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC8.48□□□□□ -1.05
TcraP01849 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Gm4271-201ENSMUST00000174444 973 ntBASIC8.48□□□□□ -1.05
TcraP01849 Gm8652-201ENSMUST00000181363 964 ntBASIC8.48□□□□□ -1.05
TcraP01849 H2-Pa-201ENSMUST00000182803 626 ntBASIC8.48□□□□□ -1.05
TcraP01849 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC8.48□□□□□ -1.05
TcraP01849 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.48□□□□□ -1.05
TcraP01849 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Gm19163-201ENSMUST00000223313 780 ntBASIC8.48□□□□□ -1.05
TcraP01849 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
TcraP01849 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Gm44152-201ENSMUST00000205007 1691 ntBASIC8.48□□□□□ -1.05
TcraP01849 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.48□□□□□ -1.05
TcraP01849 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TcraP01849 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC8.48□□□□□ -1.05
TcraP01849 Gm8320-201ENSMUST00000177584 1762 ntBASIC8.48□□□□□ -1.05
TcraP01849 Gm8303-201ENSMUST00000178371 1762 ntBASIC8.48□□□□□ -1.05
TcraP01849 Gm8331-201ENSMUST00000178433 1762 ntBASIC8.48□□□□□ -1.05
TcraP01849 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.47□□□□□ -1.05
TcraP01849 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TcraP01849 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.47□□□□□ -1.05
TcraP01849 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TcraP01849 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TcraP01849 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC8.47□□□□□ -1.05
TcraP01849 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Gm24830-201ENSMUST00000102024 166 ntBASIC8.47□□□□□ -1.05
TcraP01849 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
TcraP01849 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TcraP01849 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.47□□□□□ -1.05
TcraP01849 Gm11597-201ENSMUST00000121423 964 ntBASIC8.47□□□□□ -1.05
TcraP01849 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.47□□□□□ -1.05
TcraP01849 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.47□□□□□ -1.05
TcraP01849 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Gm43002-201ENSMUST00000200310 155 ntBASIC8.47□□□□□ -1.05
TcraP01849 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC8.47□□□□□ -1.05
TcraP01849 Gm4768-201ENSMUST00000206199 686 ntBASIC8.47□□□□□ -1.05
TcraP01849 Gm7653-201ENSMUST00000214567 508 ntBASIC8.47□□□□□ -1.05
TcraP01849 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Dhrs4-202ENSMUST00000226168 828 ntBASIC8.47□□□□□ -1.05
TcraP01849 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.47□□□□□ -1.05
TcraP01849 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms