Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P01788 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P01788 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
P01788 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
P01788 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P01788 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
P01788 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
P01788 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.14□□□□□ -0.95
P01788 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.14□□□□□ -0.95
P01788 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.14□□□□□ -0.95
P01788 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.14□□□□□ -0.95
P01788 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.14□□□□□ -0.95
P01788 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
P01788 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Gm23270-201ENSMUST00000104055 131 ntBASIC9.14□□□□□ -0.95
P01788 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 Gm12015-201ENSMUST00000117065 843 ntBASIC9.14□□□□□ -0.95
P01788 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.14□□□□□ -0.95
P01788 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.14□□□□□ -0.95
P01788 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.14□□□□□ -0.95
P01788 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.14□□□□□ -0.95
P01788 Gm807-202ENSMUST00000224929 408 ntBASIC9.14□□□□□ -0.95
P01788 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
P01788 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P01788 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P01788 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
P01788 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.13□□□□□ -0.95
P01788 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.13□□□□□ -0.95
P01788 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P01788 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
P01788 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Gm15004-201ENSMUST00000119192 630 ntBASIC9.13□□□□□ -0.95
P01788 Gm15547-201ENSMUST00000122152 333 ntBASIC9.13□□□□□ -0.95
P01788 Gm6963-201ENSMUST00000147879 379 ntBASIC9.13□□□□□ -0.95
P01788 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Snora78-201ENSMUST00000158630 128 ntBASIC9.13□□□□□ -0.95
P01788 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.13□□□□□ -0.95
P01788 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P01788 Gm29396-201ENSMUST00000185659 716 ntBASIC9.13□□□□□ -0.95
P01788 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.13□□□□□ -0.95
P01788 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.13□□□□□ -0.95
P01788 Olfr284-202ENSMUST00000206647 966 ntBASIC9.13□□□□□ -0.95
P01788 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.13□□□□□ -0.95
P01788 Gzmn-202ENSMUST00000225535 989 ntBASIC9.13□□□□□ -0.95
P01788 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms