Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubr1O70481 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubr1O70481 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Gm11475-201ENSMUST00000118482 476 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Gm5529-201ENSMUST00000165691 891 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.81□□□□□ -0.04
Ubr1O70481 Gm5340-201ENSMUST00000203733 880 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.81□□□□□ -0.04
Ubr1O70481 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.81□□□□□ -0.04
Ubr1O70481 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.81□□□□□ -0.04
Ubr1O70481 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubr1O70481 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.81□□□□□ -0.04
Ubr1O70481 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.81□□□□□ -0.04
Ubr1O70481 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr1O70481 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Gm6158-201ENSMUST00000109467 904 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm12986-201ENSMUST00000119037 967 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.8□□□□□ -0.04
Ubr1O70481 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Gm8420-201ENSMUST00000097103 598 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ubr1O70481 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm15136-201ENSMUST00000120552 533 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm15982-201ENSMUST00000121681 554 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm13981-201ENSMUST00000122360 447 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.8□□□□□ -0.04
Ubr1O70481 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr1O70481 Gm23647-201ENSMUST00000175042 109 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Rn5s-201ENSMUST00000177555 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm22109-201ENSMUST00000177995 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm22291-201ENSMUST00000178027 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm23284-201ENSMUST00000178069 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm25018-201ENSMUST00000179081 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 Gm25212-201ENSMUST00000179432 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.8□□□□□ -0.04
Ubr1O70481 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms