Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Gm23596-201ENSMUST00000104304 132 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
BckdkO55028 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.81□□□□□ -0.68
BckdkO55028 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.81□□□□□ -0.68
BckdkO55028 Gm22334-201ENSMUST00000158070 133 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Gm9550-201ENSMUST00000161130 862 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Gm8343-201ENSMUST00000182705 994 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.81□□□□□ -0.68
BckdkO55028 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Gm807-202ENSMUST00000224929 408 ntBASIC10.81□□□□□ -0.68
BckdkO55028 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.81□□□□□ -0.68
BckdkO55028 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
BckdkO55028 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
BckdkO55028 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
BckdkO55028 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
BckdkO55028 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
BckdkO55028 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gm24891-201ENSMUST00000104391 136 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Gm15515-201ENSMUST00000117827 822 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Gm23085-201ENSMUST00000157849 293 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
BckdkO55028 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Gm9211-201ENSMUST00000182882 975 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Gm4482-201ENSMUST00000200876 742 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
BckdkO55028 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
BckdkO55028 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
BckdkO55028 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 BC043934-202ENSMUST00000185694 2356 ntBASIC10.8□□□□□ -0.68
BckdkO55028 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
BckdkO55028 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
BckdkO55028 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
BckdkO55028 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.79□□□□□ -0.68
BckdkO55028 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
BckdkO55028 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms