Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm14071-201ENSMUST00000117817 509 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm15207-201ENSMUST00000119259 442 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm25890-201ENSMUST00000177643 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm22614-201ENSMUST00000178300 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm27320-201ENSMUST00000184892 109 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm28686-201ENSMUST00000187404 609 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm22042-201ENSMUST00000082989 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm26110-201ENSMUST00000083971 165 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf11bO08712 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.77□□□□□ -0.52
Tnfrsf11bO08712 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm3329-201ENSMUST00000159873 556 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm17376-201ENSMUST00000166016 84 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Mir7677-201ENSMUST00000184226 67 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm37666-201ENSMUST00000194110 866 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm43179-201ENSMUST00000198797 275 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm5186-201ENSMUST00000218781 920 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm270-201ENSMUST00000223010 976 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfrsf11bO08712 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms