Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm45094-201ENSMUST00000207013 617 ntBASIC14.04□□□□□ -0.16
NpcdF8VQB8 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.04□□□□□ -0.16
NpcdF8VQB8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm7940-201ENSMUST00000218195 769 ntBASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.04□□□□□ -0.16
NpcdF8VQB8 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Gm19891-201ENSMUST00000189771 303 ntBASIC14.03□□□□□ -0.16
NpcdF8VQB8 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.03□□□□□ -0.16
NpcdF8VQB8 Gm26035-201ENSMUST00000083065 308 ntBASIC14.03□□□□□ -0.16
NpcdF8VQB8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.03□□□□□ -0.16
NpcdF8VQB8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
NpcdF8VQB8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.02□□□□□ -0.16
NpcdF8VQB8 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NpcdF8VQB8 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm13204-201ENSMUST00000120110 821 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm24943-201ENSMUST00000158329 433 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm25830-201ENSMUST00000158923 132 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm9625-201ENSMUST00000180422 955 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm5706-201ENSMUST00000181525 993 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 AC134537.1-201ENSMUST00000219205 265 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms