Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm26361-201ENSMUST00000158868 186 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm3329-201ENSMUST00000159873 556 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm9797-202ENSMUST00000218003 294 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm7940-201ENSMUST00000218195 769 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh9F8VPK8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.88□□□□□ -0.51
Pcdh9F8VPK8 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms