Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm8643-201ENSMUST00000195228 625 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm2566-201ENSMUST00000201267 431 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm5291-201ENSMUST00000201965 899 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm18164-201ENSMUST00000213769 927 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm18166-201ENSMUST00000215557 927 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm18391-201ENSMUST00000217189 658 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm23458-201ENSMUST00000083257 169 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.71□□□□□ -0.54
Ccdc188F6WEU2 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm9133-201ENSMUST00000118289 540 ntBASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc188F6WEU2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm23129-201ENSMUST00000104259 132 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms