Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm13351-201ENSMUST00000118087 414 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm5419-201ENSMUST00000119301 527 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm14247-201ENSMUST00000120950 237 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm24954-201ENSMUST00000178831 110 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm19587-201ENSMUST00000191395 545 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm29808-201ENSMUST00000194419 468 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm44882-201ENSMUST00000205702 802 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Syngap1F6SEU4 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm7719-201ENSMUST00000182374 975 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm4654-201ENSMUST00000183305 982 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm29499-201ENSMUST00000189151 486 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm28329-201ENSMUST00000191208 689 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm29171-201ENSMUST00000191397 486 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Gm18514-201ENSMUST00000218980 436 ntBASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syngap1F6SEU4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syngap1F6SEU4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms