Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm13422-201ENSMUST00000118834 504 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm28833-201ENSMUST00000189671 559 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm9369-201ENSMUST00000196009 733 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm7082-201ENSMUST00000209880 969 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Mir1905-201ENSMUST00000122779 82 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Gm34379-201ENSMUST00000195036 290 ntBASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn3aA2ASI5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm25562-201ENSMUST00000104608 133 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm11801-201ENSMUST00000117807 746 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm14213-201ENSMUST00000119778 768 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm22877-201ENSMUST00000175451 105 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm24248-201ENSMUST00000157321 322 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm8723-201ENSMUST00000166076 820 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm8701-201ENSMUST00000169259 874 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm19246-201ENSMUST00000173599 255 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Gm9102-201ENSMUST00000219250 465 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.84□□□□□ -0.35
Scn3aA2ASI5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn3aA2ASI5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn3aA2ASI5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Gm13284-201ENSMUST00000121020 547 ntBASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms