Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Mir7677-201ENSMUST00000184226 67 ntBASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm11783-201ENSMUST00000119549 885 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm14208-201ENSMUST00000119645 678 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm8566-201ENSMUST00000120174 465 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm3329-201ENSMUST00000159873 556 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb1A2AQ07 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.86□□□□□ -0.51
Tubb1A2AQ07 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms