Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm30946-201ENSMUST00000198288 724 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm42816-201ENSMUST00000198433 325 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 Gm9353-201ENSMUST00000200472 604 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.12□□□□□ -0.47
Scn1aA2APX8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1aA2APX8 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm34023-201ENSMUST00000195539 217 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm44323-201ENSMUST00000198689 129 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm8420-201ENSMUST00000097103 598 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm12218-201ENSMUST00000117666 399 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm8197-202ENSMUST00000193422 934 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn1aA2APX8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1aA2APX8 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.11□□□□□ -0.47
Scn1aA2APX8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms