Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm6714-201ENSMUST00000218677 2330 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm12928-201ENSMUST00000117115 573 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm9083-201ENSMUST00000120423 819 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm38671-201ENSMUST00000200573 130 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm20949-201ENSMUST00000206478 952 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm6007-201ENSMUST00000208170 823 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav8-1A0A075B641 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm43002-201ENSMUST00000200310 155 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms