Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm6621-201ENSMUST00000193251 772 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm44487-201ENSMUST00000205145 325 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm45598-202ENSMUST00000210719 986 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm21769-201ENSMUST00000211922 111 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gm43002-201ENSMUST00000200310 155 ntBASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gm4607-201ENSMUST00000206649 577 ntBASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gm2553-201ENSMUST00000215986 605 ntBASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Gzmn-202ENSMUST00000225535 989 ntBASIC10.49□□□□□ -0.73
H2afb3S4R1G7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb3S4R1G7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
H2afb3S4R1G7 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms