Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.4□□□□□ -0.74
Nubp2Q9R061 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nubp2Q9R061 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nubp2Q9R061 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.39□□□□□ -0.75
Nubp2Q9R061 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm12266-201ENSMUST00000120311 962 ntBASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm43138-201ENSMUST00000199123 708 ntBASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.39□□□□□ -0.75
Nubp2Q9R061 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.39□□□□□ -0.75
Nubp2Q9R061 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.39□□□□□ -0.75
Nubp2Q9R061 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nubp2Q9R061 Mir5120-201ENSMUST00000175020 78 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.38□□□□□ -0.75
Nubp2Q9R061 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.38□□□□□ -0.75
Nubp2Q9R061 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms