Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm13123-201ENSMUST00000122173 492 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Mir7654-201ENSMUST00000185082 70 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trem1Q9JKE2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm11618-201ENSMUST00000117946 267 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm14921-201ENSMUST00000118643 908 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm23363-201ENSMUST00000175024 79 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm44855-201ENSMUST00000205725 362 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm18473-201ENSMUST00000220543 868 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm5867-201ENSMUST00000063197 592 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms