Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm43184-201ENSMUST00000197247 542 ntBASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Gm6867-201ENSMUST00000219165 425 ntBASIC12.1□□□□□ -0.47
Cpne8Q9DC53 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpne8Q9DC53 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Gm12857-201ENSMUST00000117678 592 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Gm14130-201ENSMUST00000118417 987 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Gm28071-201ENSMUST00000190355 478 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Gm18065-201ENSMUST00000221395 526 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpne8Q9DC53 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.08□□□□□ -0.47
Cpne8Q9DC53 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpne8Q9DC53 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpne8Q9DC53 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpne8Q9DC53 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Cpne8Q9DC53 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Gm15207-201ENSMUST00000119259 442 ntBASIC12.08□□□□□ -0.48
Cpne8Q9DC53 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Mir6420-201ENSMUST00000185032 102 ntBASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms