Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm13297-201ENSMUST00000120205 934 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 AY702102-202ENSMUST00000194651 1173 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm30285-201ENSMUST00000214614 422 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ssr1Q9CY50 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.71□□□□□ -0.38
Ssr1Q9CY50 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm14247-201ENSMUST00000120950 237 ntBASIC12.7□□□□□ -0.38
Ssr1Q9CY50 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.7□□□□□ -0.38
Ssr1Q9CY50 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.69□□□□□ -0.38
Ssr1Q9CY50 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ssr1Q9CY50 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms