Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim8Q99PJ2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm11793-201ENSMUST00000120433 981 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm11960-201ENSMUST00000122068 925 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Mospd4-201ENSMUST00000180618 576 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm9192-201ENSMUST00000183221 985 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm44487-201ENSMUST00000205145 325 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm8712-201ENSMUST00000221090 701 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms