Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm5616-201ENSMUST00000165252 384 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm8741-201ENSMUST00000174736 384 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm8343-201ENSMUST00000182705 994 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm37259-201ENSMUST00000193903 849 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm7783-201ENSMUST00000204795 781 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm4157-201ENSMUST00000211647 679 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm17827-201ENSMUST00000211825 742 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cstf3Q99LI7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm17812-201ENSMUST00000204935 318 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Lect2-202ENSMUST00000225183 823 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Olfr582-201ENSMUST00000098212 960 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 246.2 ms