Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm45433-201ENSMUST00000209386 247 ntBASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm18212-201ENSMUST00000211678 889 ntBASIC12.28□□□□□ -0.44
Usp11Q99K46 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp11Q99K46 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp11Q99K46 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp11Q99K46 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.27□□□□□ -0.44
Usp11Q99K46 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp11Q99K46 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.27□□□□□ -0.44
Usp11Q99K46 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.27□□□□□ -0.44
Usp11Q99K46 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.27□□□□□ -0.44
Usp11Q99K46 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp11Q99K46 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp11Q99K46 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Usp11Q99K46 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.27□□□□□ -0.45
Usp11Q99K46 Gm12164-201ENSMUST00000121695 551 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.27□□□□□ -0.45
Usp11Q99K46 Gm43962-201ENSMUST00000203898 190 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Mir433-201ENSMUST00000093564 124 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Usp11Q99K46 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp11Q99K46 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Usp11Q99K46 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.27□□□□□ -0.45
Usp11Q99K46 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Usp11Q99K46 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp11Q99K46 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms