Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm14071-201ENSMUST00000117817 509 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Mir5132-201ENSMUST00000175166 71 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm3786-201ENSMUST00000202659 378 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Mir433-201ENSMUST00000093564 124 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb1Q91Y08 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.08□□□□□ -0.47
Pcdhb1Q91Y08 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb1Q91Y08 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb1Q91Y08 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm12501-201ENSMUST00000119163 529 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm23085-201ENSMUST00000157849 293 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm18734-201ENSMUST00000172937 808 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm10807-201ENSMUST00000177134 795 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm38151-201ENSMUST00000195085 289 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm4482-201ENSMUST00000200876 742 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb1Q91Y08 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb1Q91Y08 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms