Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm23200-201ENSMUST00000104379 132 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm12579-201ENSMUST00000118040 783 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm13461-201ENSMUST00000120980 662 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm4978-201ENSMUST00000071565 801 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm14277-201ENSMUST00000121195 360 ntBASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb6Q91XZ4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm24891-201ENSMUST00000104391 136 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm13916-201ENSMUST00000117368 628 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm13035-201ENSMUST00000117496 342 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm7851-201ENSMUST00000117574 323 ntBASIC11.93□□□□□ -0.5
Pcdhb6Q91XZ4 Gm7857-201ENSMUST00000117957 358 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms