Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm8768-201ENSMUST00000220020 826 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Gm9701-201ENSMUST00000077976 427 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Gm6304-201ENSMUST00000096579 447 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
StrcQ8VIM6 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.51□□□□□ -0.25
StrcQ8VIM6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
StrcQ8VIM6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm10020-201ENSMUST00000081993 612 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm25514-201ENSMUST00000083860 135 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm12028-201ENSMUST00000118065 436 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm21631-201ENSMUST00000195041 754 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm38349-201ENSMUST00000195732 462 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.5□□□□□ -0.25
StrcQ8VIM6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
StrcQ8VIM6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Platr10-202ENSMUST00000191479 818 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm18862-201ENSMUST00000204643 933 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
StrcQ8VIM6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
StrcQ8VIM6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms