Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm8566-201ENSMUST00000120174 465 ntBASIC10.98□□□□□ -0.65
Clrn1Q8K445 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm45575-201ENSMUST00000210283 548 ntBASIC10.98□□□□□ -0.65
Clrn1Q8K445 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm5363-201ENSMUST00000211927 938 ntBASIC10.98□□□□□ -0.65
Clrn1Q8K445 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm21811-201ENSMUST00000096485 930 ntBASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.98□□□□□ -0.65
Clrn1Q8K445 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clrn1Q8K445 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm14724-201ENSMUST00000118400 537 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm8100-201ENSMUST00000182906 988 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm27552-201ENSMUST00000183351 62 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm27844-201ENSMUST00000183613 62 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Mir6927-201ENSMUST00000184494 71 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm38314-201ENSMUST00000195709 625 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm2965-201ENSMUST00000198365 343 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms